Publicly available data, images, statistical code, and software

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Seethepalli, A., Ottley, C., Childs, J., Cope, K., Fine, A., Lagergren, J., Kalluri, U., Iversen, C., and York, L. M. (2024). Root images for testing concatenation and statistical analysis with RhizoVision Explorer [Data set]. Zenodo. DOI: 10.5281/zenodo.12667583

Seethepalli, A., Ottley, C., Lagergren, J., & York, L. M. (2024). Python script for root image concatenation for RhizoVision Explorer [Software]. Zenodo. DOI: 10.5281/zenodo.12668073

Seethepalli, A., Ottley, C., Lagergren, J., & York, L. M. (2024). Statistical aggregation in R for RhizoVision Explorer and manuscript figure code. [Software]. Zenodo. DOI: 10.5281/zenodo.12668177

Lagergren, J., Pavicic, M., Chhetri, H., York, L. M., Hyatt, D., Kainer, D., Rutter, E., Flores, K., Bailey-Bale, J., Klein, M., Taylor, G., Jacobson, D., & Streich, J. (2023). Supporting information for "Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa" (1.1.0) [Data set]. Zenodo. DOI: 10.5281/zenodo.7908197

York, L. M. (2023). Setting the scale for scanner or camera-based imaging platforms [Data set]. Zenodo. DOI: 10.5281/zenodo.7825934

York, L. M. (2023). Root scanning using a flatbed scanner with transparency unit [Protocol]. Zenodo. DOI: 10.5281/zenodo.7926796

York, L. M. (2023). Setting up the Epson Expression 12000XL for root scanning [Protocol]. Zenodo. DOI: 10.5281/zenodo.7925991

Xu, Z, York, L. M., Seethepalli, A., Bucciarelli, B., Cheng, H., Samac, D. A. (2022). Data for manuscript on objective phenotyping of alfalfa roots [Data set]. Zenodo. DOI: 10.5281/zenodo.5879779

Dhakal, K., Seethepalli, A., Griffiths, M., Guo, H., Freschet, G. T., and York, L. M. (2021). Data and statistical code for the manuscript on RhizoVision Explorer for root image analysis [Data set]. Zenodo. DOI: 10.5281/zenodo.4677552

Dhakal, K., Seethepalli, A., Griffiths, M., Guo, H., Freschet, G. T., and York, L. M. (2021). Images of copper wires with various diameters for validating root image analysis [Data set]. Zenodo. DOI: 10.5281/zenodo.4677545

Dhakal, K., Seethepalli, A., Griffiths, M., Guo, H., Freschet, G. T., and York, L. M. (2021). Scanned images of roots from wild herbaceous species, trees, maize, and wheat [Data set]. Zenodo. DOI: 10.5281/zenodo.4677750

Griffiths, M., Seethepalli, A., and York, L. M. (2021). Data and statistical analysis scripts for manuscript on switchgrass roots in nitrogen and water stresses [Data set]. Zenodo. DOI: 10.5281/zenodo.4281436

Seethepalli, A. and York, L. M. (2020). RhizoVision Explorer - Interactive software for generalized root image analysis designed for everyone (Version 2.0.2) [Software]. Zenodo. DOI: 10.5281/zenodo.4095629

York, L. M. (2020). Plans for root scanning trays to use on flatbed scanners [Data set]. Zenodo. DOI: 10.5281/zenodo.4122423

Guo, H., Griffiths, M., Seethepalli, A., Dhakal, K., and York, L. M. (2020). Protocol and data analysis scripts for high-throughput phenotyping of specific root respiration [Data set]. Zenodo. DOI: 10.5281/zenodo.4247872

Guo, H., Ayalew, H., Seethepalli, A., Dhakal, K., Griffiths, M., Ma, X., and York, L. M. (2020). Data and statistical analysis scripts for manuscript on high-throughput phenotyping of root economics in wheat [Data set]. Zenodo. DOI: 10.5281/zenodo.4247893

Griffiths, M. and York, L. M. (2020). Root multiple ion uptake kinetics data for maize NAM founders, statistical code, and RhizoFlux hardware plans [Data set]. Zenodo. DOI: 10.5281/zenodo.4474523

Griffiths, M. and York, L. M. (2020). Meta-analysis of multiple ion uptake kinetics in crop roots [Data set]. Zenodo. DOI: 10.5281/zenodo.3605654

Seethepalli, A., Guo, H., and York, L. M. (2019). Root crown images of soybean and wheat and statistical analysis for RhizoVision Crown [Data set]. Zenodo. DOI:10.5281/zenodo.3598638

Seethepalli A. and York L. M. (2019). RhizoVision Analyzer: Software for high-throughput measurements from images of crop root crowns [Software]. Zenodo. DOI: 10.5281/zenodo.2585892

Seethepalli A. and York L. M. (2019). RhizoVision Imager: Software to control machine vision cameras for plant phenotyping [Software]. Zenodo. DOI: 10.5281/zenodo.2585882

York L. M., Young C. A., Mattupalli, C., and Seethepalli, A. (2018). Images and statistical analysis of alfalfa root crowns from inside and outside disease rings caused by cotton root rot [Data set]. Zenodo. DOI:10.5281/zenodo.2172832